Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Gm5874-201ENSMUST00000096101 508 ntBASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Carlr-201ENSMUST00000181515 2574 ntBASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1brtQ3UNC9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Gm11336-201ENSMUST00000118168 334 ntBASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 H2-K2-201ENSMUST00000174250 1049 ntBASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1brtQ3UNC9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Cks1brtQ3UNC9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms