Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sf3b2Q3UJB0 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.9■□□□□ 0.62
Sf3b2Q3UJB0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Sf3b2Q3UJB0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3b2Q3UJB0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3b2Q3UJB0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3b2Q3UJB0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3b2Q3UJB0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sf3b2Q3UJB0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sf3b2Q3UJB0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sf3b2Q3UJB0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Gm11814-201ENSMUST00000119515 929 ntBASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Gm27847-201ENSMUST00000183711 107 ntBASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Gm27375-201ENSMUST00000183799 107 ntBASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Gm17795-201ENSMUST00000214505 757 ntBASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Gm7399-201ENSMUST00000032395 858 ntBASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 BC001981-202ENSMUST00000191393 1545 ntBASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b2Q3UJB0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b2Q3UJB0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Gm8652-201ENSMUST00000181363 964 ntBASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Gm37230-201ENSMUST00000194491 818 ntBASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Gm7561-201ENSMUST00000211203 886 ntBASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Gm6091-201ENSMUST00000098307 165 ntBASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b2Q3UJB0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 CT485787.1-201ENSMUST00000225617 968 ntBASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b2Q3UJB0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms