Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm6335-201ENSMUST00000118081 1194 ntBASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm7816-201ENSMUST00000119884 1194 ntBASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm15542-201ENSMUST00000121585 1194 ntBASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm7666-201ENSMUST00000146631 819 ntBASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 AA914427-201ENSMUST00000193194 1166 ntBASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm7498-201ENSMUST00000203282 1084 ntBASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm12795-201ENSMUST00000117594 539 ntBASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm8365-201ENSMUST00000197334 648 ntBASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Gm11222-201ENSMUST00000119005 738 ntBASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Ighv1-25-201ENSMUST00000195638 345 ntBASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Gm3671-201ENSMUST00000182463 1007 ntBASIC7.65□□□□□ -1.19
Ush2AQ2QI47 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC7.65□□□□□ -1.19
Ush2AQ2QI47 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Gm18615-201ENSMUST00000222919 1031 ntBASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 AC154849.4-201ENSMUST00000224868 365 ntBASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Gm43579-201ENSMUST00000202387 1307 ntBASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Gm12203-201ENSMUST00000118235 598 ntBASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Gm12209-201ENSMUST00000120089 596 ntBASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Gm4935-201ENSMUST00000221316 1198 ntBASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms