Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Gm9182-201ENSMUST00000217829 639 ntBASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Gm19220-201ENSMUST00000222682 803 ntBASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chrna5Q2MKA5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Gm15460-201ENSMUST00000118147 391 ntBASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 AA619741-201ENSMUST00000195095 646 ntBASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chrna5Q2MKA5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chrna5Q2MKA5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.39■□□□□ 0.38
Chrna5Q2MKA5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chrna5Q2MKA5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chrna5Q2MKA5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Gm15393-201ENSMUST00000120499 219 ntBASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Gm9002-201ENSMUST00000178437 499 ntBASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Gm28911-201ENSMUST00000188837 117 ntBASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chrna5Q2MKA5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Gm12585-201ENSMUST00000117307 290 ntBASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 AY702102-202ENSMUST00000194651 1173 ntBASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chrna5Q2MKA5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms