Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.27□□□□□ -0.45
Tff1Q08423 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tff1Q08423 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.27□□□□□ -0.45
Tff1Q08423 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Tff1Q08423 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Tff1Q08423 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Tff1Q08423 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Gm15358-201ENSMUST00000119249 520 ntBASIC12.26□□□□□ -0.45
Tff1Q08423 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Tff1Q08423 Gm27646-201ENSMUST00000183989 110 ntBASIC12.26□□□□□ -0.45
Tff1Q08423 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.26□□□□□ -0.45
Tff1Q08423 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.26□□□□□ -0.45
Tff1Q08423 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Tff1Q08423 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.26□□□□□ -0.45
Tff1Q08423 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Tff1Q08423 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tff1Q08423 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tff1Q08423 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tff1Q08423 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.26□□□□□ -0.45
Tff1Q08423 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Tff1Q08423 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tff1Q08423 Celf4-206ENSMUST00000224553 1729 ntBASIC12.25□□□□□ -0.45
Tff1Q08423 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tff1Q08423 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Tff1Q08423 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tff1Q08423 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Tff1Q08423 Gm14140-201ENSMUST00000119999 995 ntBASIC12.25□□□□□ -0.45
Tff1Q08423 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Tff1Q08423 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Gm6089-201ENSMUST00000197666 938 ntBASIC12.25□□□□□ -0.45
Tff1Q08423 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.25□□□□□ -0.45
Tff1Q08423 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.25□□□□□ -0.45
Tff1Q08423 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tff1Q08423 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.25□□□□□ -0.45
Tff1Q08423 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.25□□□□□ -0.45
Tff1Q08423 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Tff1Q08423 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Tff1Q08423 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tff1Q08423 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Tff1Q08423 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms