Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.71□□□□□ -0.05
Col6a2Q02788 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.71□□□□□ -0.05
Col6a2Q02788 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.71□□□□□ -0.05
Col6a2Q02788 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.71□□□□□ -0.05
Col6a2Q02788 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Col6a2Q02788 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Auts2-212ENSMUST00000178555 309 ntBASIC14.71□□□□□ -0.05
Col6a2Q02788 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.71□□□□□ -0.05
Col6a2Q02788 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.71□□□□□ -0.05
Col6a2Q02788 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.71□□□□□ -0.05
Col6a2Q02788 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a2Q02788 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a2Q02788 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a2Q02788 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a2Q02788 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a2Q02788 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Col6a2Q02788 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a2Q02788 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a2Q02788 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Col6a2Q02788 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col6a2Q02788 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.7□□□□□ -0.06
Col6a2Q02788 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 AA543401-201ENSMUST00000164248 1269 ntBASIC14.7□□□□□ -0.06
Col6a2Q02788 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.7□□□□□ -0.06
Col6a2Q02788 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.7□□□□□ -0.06
Col6a2Q02788 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.7□□□□□ -0.06
Col6a2Q02788 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
Col6a2Q02788 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col6a2Q02788 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a2Q02788 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col6a2Q02788 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Col6a2Q02788 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.69□□□□□ -0.06
Col6a2Q02788 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col6a2Q02788 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.69□□□□□ -0.06
Col6a2Q02788 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col6a2Q02788 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.69□□□□□ -0.06
Col6a2Q02788 Gm27430-201ENSMUST00000184585 107 ntBASIC14.69□□□□□ -0.06
Col6a2Q02788 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.69□□□□□ -0.06
Col6a2Q02788 Gm44333-201ENSMUST00000197168 107 ntBASIC14.69□□□□□ -0.06
Col6a2Q02788 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a2Q02788 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms