Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.17□□□□□ -0.46
Gfra1P97785 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Gm24158-201ENSMUST00000175263 71 ntBASIC12.17□□□□□ -0.46
Gfra1P97785 Gm10253-201ENSMUST00000194270 940 ntBASIC12.17□□□□□ -0.46
Gfra1P97785 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.17□□□□□ -0.46
Gfra1P97785 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Gfra1P97785 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gfra1P97785 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.17□□□□□ -0.46
Gfra1P97785 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gfra1P97785 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gfra1P97785 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.17□□□□□ -0.46
Gfra1P97785 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gfra1P97785 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.17□□□□□ -0.46
Gfra1P97785 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gfra1P97785 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.17□□□□□ -0.46
Gfra1P97785 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Gfra1P97785 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gfra1P97785 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.16□□□□□ -0.46
Gfra1P97785 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gfra1P97785 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Gfra1P97785 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gfra1P97785 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.16□□□□□ -0.46
Gfra1P97785 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gfra1P97785 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.16□□□□□ -0.46
Gfra1P97785 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.16□□□□□ -0.46
Gfra1P97785 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.16□□□□□ -0.46
Gfra1P97785 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gfra1P97785 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.16□□□□□ -0.46
Gfra1P97785 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.16□□□□□ -0.46
Gfra1P97785 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.16□□□□□ -0.46
Gfra1P97785 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gfra1P97785 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.16□□□□□ -0.46
Gfra1P97785 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.16□□□□□ -0.46
Gfra1P97785 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.16□□□□□ -0.46
Gfra1P97785 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Gfra1P97785 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.16□□□□□ -0.46
Gfra1P97785 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gfra1P97785 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gfra1P97785 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gfra1P97785 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gfra1P97785 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gfra1P97785 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Gfra1P97785 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gfra1P97785 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gfra1P97785 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gfra1P97785 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gfra1P97785 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gfra1P97785 Gm22065-201ENSMUST00000103753 110 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Gm22066-201ENSMUST00000103761 110 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Gm24932-201ENSMUST00000103763 110 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Gm24115-201ENSMUST00000103799 110 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Gm22190-201ENSMUST00000103827 110 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Gm22191-201ENSMUST00000103831 110 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Gm24721-201ENSMUST00000103849 110 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Gm28018-201ENSMUST00000103869 110 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Gm26399-201ENSMUST00000103937 110 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gfra1P97785 Gm2810-201ENSMUST00000118681 990 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Gm25349-201ENSMUST00000177728 110 ntBASIC12.15□□□□□ -0.46
Gfra1P97785 Gm23616-201ENSMUST00000177797 110 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms