Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Smarcc1P97496 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.35■□□□□ 0.53
Smarcc1P97496 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.35■□□□□ 0.53
Smarcc1P97496 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.35■□□□□ 0.53
Smarcc1P97496 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.35■□□□□ 0.53
Smarcc1P97496 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smarcc1P97496 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smarcc1P97496 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc1P97496 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smarcc1P97496 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smarcc1P97496 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Smarcc1P97496 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.34■□□□□ 0.53
Smarcc1P97496 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Smarcc1P97496 Mir1938-201ENSMUST00000158746 100 ntBASIC18.34■□□□□ 0.53
Smarcc1P97496 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.34■□□□□ 0.53
Smarcc1P97496 Gm9182-201ENSMUST00000217829 639 ntBASIC18.34■□□□□ 0.53
Smarcc1P97496 Gm19220-201ENSMUST00000222682 803 ntBASIC18.34■□□□□ 0.53
Smarcc1P97496 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.34■□□□□ 0.53
Smarcc1P97496 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.34■□□□□ 0.53
Smarcc1P97496 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Smarcc1P97496 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.34■□□□□ 0.53
Smarcc1P97496 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc1P97496 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.34■□□□□ 0.53
Smarcc1P97496 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.34■□□□□ 0.53
Smarcc1P97496 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc1P97496 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc1P97496 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc1P97496 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc1P97496 Gm8749-201ENSMUST00000117737 331 ntBASIC18.33■□□□□ 0.52
Smarcc1P97496 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.33■□□□□ 0.52
Smarcc1P97496 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.33■□□□□ 0.52
Smarcc1P97496 Gm37230-201ENSMUST00000194491 818 ntBASIC18.33■□□□□ 0.52
Smarcc1P97496 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.33■□□□□ 0.52
Smarcc1P97496 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.33■□□□□ 0.52
Smarcc1P97496 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc1P97496 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc1P97496 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc1P97496 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc1P97496 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.33■□□□□ 0.52
Smarcc1P97496 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc1P97496 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Smarcc1P97496 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc1P97496 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc1P97496 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.32■□□□□ 0.52
Smarcc1P97496 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Smarcc1P97496 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Smarcc1P97496 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Smarcc1P97496 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.32■□□□□ 0.52
Smarcc1P97496 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.32■□□□□ 0.52
Smarcc1P97496 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc1P97496 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Smarcc1P97496 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smarcc1P97496 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.31■□□□□ 0.52
Smarcc1P97496 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms