Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Gm28631-201ENSMUST00000190740 334 ntBASIC18.42■□□□□ 0.54
Nkx2-3P97334 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.42■□□□□ 0.54
Nkx2-3P97334 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.42■□□□□ 0.54
Nkx2-3P97334 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nkx2-3P97334 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.41■□□□□ 0.54
Nkx2-3P97334 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Gm14127-201ENSMUST00000117906 678 ntBASIC18.41■□□□□ 0.54
Nkx2-3P97334 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 AA619741-201ENSMUST00000195095 646 ntBASIC18.41■□□□□ 0.54
Nkx2-3P97334 Gm18018-201ENSMUST00000198273 408 ntBASIC18.41■□□□□ 0.54
Nkx2-3P97334 Gm45384-201ENSMUST00000210451 277 ntBASIC18.41■□□□□ 0.54
Nkx2-3P97334 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.41■□□□□ 0.54
Nkx2-3P97334 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.41■□□□□ 0.54
Nkx2-3P97334 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-3P97334 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nkx2-3P97334 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Gm15678-201ENSMUST00000117573 960 ntBASIC18.4■□□□□ 0.54
Nkx2-3P97334 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Gm12091-201ENSMUST00000146791 830 ntBASIC18.4■□□□□ 0.54
Nkx2-3P97334 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Gm37917-201ENSMUST00000194711 392 ntBASIC18.4■□□□□ 0.54
Nkx2-3P97334 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.4■□□□□ 0.54
Nkx2-3P97334 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.4■□□□□ 0.54
Nkx2-3P97334 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.4■□□□□ 0.54
Nkx2-3P97334 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-3P97334 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nkx2-3P97334 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.39■□□□□ 0.54
Nkx2-3P97334 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nkx2-3P97334 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Gm15460-201ENSMUST00000118147 391 ntBASIC18.39■□□□□ 0.53
Nkx2-3P97334 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx2-3P97334 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.39■□□□□ 0.53
Nkx2-3P97334 Gm18624-201ENSMUST00000220966 658 ntBASIC18.39■□□□□ 0.53
Nkx2-3P97334 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx2-3P97334 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms