Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC9.84□□□□□ -0.83
PrkdcP97313 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.84□□□□□ -0.83
PrkdcP97313 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC9.84□□□□□ -0.83
PrkdcP97313 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
PrkdcP97313 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.84□□□□□ -0.83
PrkdcP97313 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.84□□□□□ -0.83
PrkdcP97313 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Ankra2-208ENSMUST00000226100 1476 ntBASIC9.84□□□□□ -0.83
PrkdcP97313 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Mir686-201ENSMUST00000102174 109 ntBASIC9.84□□□□□ -0.83
PrkdcP97313 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.84□□□□□ -0.83
PrkdcP97313 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Gm9333-201ENSMUST00000205452 1323 ntBASIC9.83□□□□□ -0.84
PrkdcP97313 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PrkdcP97313 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PrkdcP97313 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PrkdcP97313 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PrkdcP97313 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PrkdcP97313 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PrkdcP97313 Gm1335-201ENSMUST00000121653 386 ntBASIC9.83□□□□□ -0.84
PrkdcP97313 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC9.83□□□□□ -0.84
PrkdcP97313 Gm10275-202ENSMUST00000168697 495 ntBASIC9.83□□□□□ -0.84
PrkdcP97313 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.83□□□□□ -0.84
PrkdcP97313 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.83□□□□□ -0.84
PrkdcP97313 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC9.83□□□□□ -0.84
PrkdcP97313 Gm10275-201ENSMUST00000092620 635 ntBASIC9.83□□□□□ -0.84
PrkdcP97313 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PrkdcP97313 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.83□□□□□ -0.84
PrkdcP97313 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PrkdcP97313 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PrkdcP97313 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.83□□□□□ -0.84
PrkdcP97313 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
PrkdcP97313 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PrkdcP97313 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Gm2383-201ENSMUST00000181461 807 ntBASIC9.83□□□□□ -0.84
PrkdcP97313 Gm37008-201ENSMUST00000195712 319 ntBASIC9.83□□□□□ -0.84
PrkdcP97313 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PrkdcP97313 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Gm42473-201ENSMUST00000201056 2291 ntBASIC9.83□□□□□ -0.84
PrkdcP97313 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC9.83□□□□□ -0.84
PrkdcP97313 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PrkdcP97313 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
PrkdcP97313 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.82□□□□□ -0.84
PrkdcP97313 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
PrkdcP97313 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC9.82□□□□□ -0.84
PrkdcP97313 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC9.82□□□□□ -0.84
PrkdcP97313 Gm8285-201ENSMUST00000208293 759 ntBASIC9.82□□□□□ -0.84
PrkdcP97313 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.82□□□□□ -0.84
PrkdcP97313 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms