Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Gm37912-201ENSMUST00000191895 3076 ntBASIC16■□□□□ 0.15
Trim43cP86449 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16■□□□□ 0.15
Trim43cP86449 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Trim43cP86449 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trim43cP86449 Gm6973-201ENSMUST00000117080 721 ntBASIC16■□□□□ 0.15
Trim43cP86449 Gm5479-201ENSMUST00000160578 435 ntBASIC16■□□□□ 0.15
Trim43cP86449 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trim43cP86449 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Trim43cP86449 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16■□□□□ 0.15
Trim43cP86449 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16■□□□□ 0.15
Trim43cP86449 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trim43cP86449 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trim43cP86449 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim43cP86449 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trim43cP86449 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.99■□□□□ 0.15
Trim43cP86449 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.99■□□□□ 0.15
Trim43cP86449 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trim43cP86449 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.99■□□□□ 0.15
Trim43cP86449 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trim43cP86449 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trim43cP86449 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Gm37230-201ENSMUST00000194491 818 ntBASIC15.99■□□□□ 0.15
Trim43cP86449 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.99■□□□□ 0.15
Trim43cP86449 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trim43cP86449 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.99■□□□□ 0.15
Trim43cP86449 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Trim43cP86449 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.99■□□□□ 0.15
Trim43cP86449 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.99■□□□□ 0.15
Trim43cP86449 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim43cP86449 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trim43cP86449 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.98■□□□□ 0.15
Trim43cP86449 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.98■□□□□ 0.15
Trim43cP86449 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.98■□□□□ 0.15
Trim43cP86449 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.98■□□□□ 0.15
Trim43cP86449 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.98■□□□□ 0.15
Trim43cP86449 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.98■□□□□ 0.15
Trim43cP86449 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.98■□□□□ 0.15
Trim43cP86449 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trim43cP86449 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.98■□□□□ 0.15
Trim43cP86449 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
Trim43cP86449 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim43cP86449 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms