Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.42□□□□□ -0.42
Gabra1P62812 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.42□□□□□ -0.42
Gabra1P62812 Gm10252-201ENSMUST00000209541 832 ntBASIC12.42□□□□□ -0.42
Gabra1P62812 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.42□□□□□ -0.42
Gabra1P62812 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.42□□□□□ -0.42
Gabra1P62812 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gabra1P62812 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gabra1P62812 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gabra1P62812 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Gm22697-201ENSMUST00000175194 63 ntBASIC12.41□□□□□ -0.42
Gabra1P62812 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Gabra1P62812 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.41□□□□□ -0.42
Gabra1P62812 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gabra1P62812 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.41□□□□□ -0.42
Gabra1P62812 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.4□□□□□ -0.42
Gabra1P62812 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.4□□□□□ -0.42
Gabra1P62812 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.4□□□□□ -0.42
Gabra1P62812 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.4□□□□□ -0.42
Gabra1P62812 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.4□□□□□ -0.42
Gabra1P62812 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Gabra1P62812 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Gabra1P62812 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.4□□□□□ -0.42
Gabra1P62812 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.4□□□□□ -0.42
Gabra1P62812 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.4□□□□□ -0.42
Gabra1P62812 Gm19164-201ENSMUST00000210667 640 ntBASIC12.4□□□□□ -0.42
Gabra1P62812 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Gabra1P62812 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Gabra1P62812 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.4□□□□□ -0.42
Gabra1P62812 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Gabra1P62812 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Gabra1P62812 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.4□□□□□ -0.42
Gabra1P62812 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Gabra1P62812 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gabra1P62812 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gabra1P62812 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.4□□□□□ -0.43
Gabra1P62812 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gabra1P62812 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gabra1P62812 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Gabra1P62812 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Gabra1P62812 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gabra1P62812 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gabra1P62812 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Gabra1P62812 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gabra1P62812 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms