Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.29□□□□□ -0.44
Lsm5P62322 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.29□□□□□ -0.44
Lsm5P62322 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.29□□□□□ -0.44
Lsm5P62322 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.29□□□□□ -0.44
Lsm5P62322 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lsm5P62322 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm5P62322 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.29□□□□□ -0.44
Lsm5P62322 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lsm5P62322 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.28□□□□□ -0.44
Lsm5P62322 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.28□□□□□ -0.44
Lsm5P62322 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lsm5P62322 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Gm8520-201ENSMUST00000186517 868 ntBASIC12.28□□□□□ -0.44
Lsm5P62322 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.28□□□□□ -0.44
Lsm5P62322 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.28□□□□□ -0.44
Lsm5P62322 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.28□□□□□ -0.44
Lsm5P62322 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.28□□□□□ -0.44
Lsm5P62322 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm5P62322 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm5P62322 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm5P62322 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm5P62322 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm5P62322 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm5P62322 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Lsm5P62322 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Lsm5P62322 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Lsm5P62322 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.27□□□□□ -0.44
Lsm5P62322 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Gm15039-201ENSMUST00000118914 875 ntBASIC12.27□□□□□ -0.45
Lsm5P62322 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.27□□□□□ -0.45
Lsm5P62322 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Lsm5P62322 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Lsm5P62322 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Lsm5P62322 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm5P62322 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm5P62322 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm5P62322 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Gm13559-201ENSMUST00000120476 863 ntBASIC12.26□□□□□ -0.45
Lsm5P62322 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.26□□□□□ -0.45
Lsm5P62322 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.26□□□□□ -0.45
Lsm5P62322 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lsm5P62322 Gm10812-201ENSMUST00000099864 546 ntBASIC12.26□□□□□ -0.45
Lsm5P62322 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms