Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lsm6P62313 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lsm6P62313 Gm9726-201ENSMUST00000180321 678 ntBASIC12.92□□□□□ -0.34
Lsm6P62313 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.92□□□□□ -0.34
Lsm6P62313 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.92□□□□□ -0.34
Lsm6P62313 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Lsm6P62313 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lsm6P62313 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.92□□□□□ -0.34
Lsm6P62313 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lsm6P62313 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Lsm6P62313 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Lsm6P62313 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.91□□□□□ -0.34
Lsm6P62313 Gm23547-201ENSMUST00000158210 271 ntBASIC12.91□□□□□ -0.34
Lsm6P62313 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.91□□□□□ -0.34
Lsm6P62313 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.91□□□□□ -0.34
Lsm6P62313 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lsm6P62313 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lsm6P62313 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.91□□□□□ -0.34
Lsm6P62313 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
Lsm6P62313 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm6P62313 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Gm9727-201ENSMUST00000161387 555 ntBASIC12.9□□□□□ -0.34
Lsm6P62313 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.9□□□□□ -0.34
Lsm6P62313 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.9□□□□□ -0.34
Lsm6P62313 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.9□□□□□ -0.34
Lsm6P62313 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.9□□□□□ -0.34
Lsm6P62313 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm6P62313 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lsm6P62313 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms