Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.45□□□□□ -0.26
Lsm3P62311 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.45□□□□□ -0.26
Lsm3P62311 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Lsm3P62311 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Lsm3P62311 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Lsm3P62311 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Lsm3P62311 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Gm21814-202ENSMUST00000203277 873 ntBASIC13.44□□□□□ -0.26
Lsm3P62311 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.44□□□□□ -0.26
Lsm3P62311 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.44□□□□□ -0.26
Lsm3P62311 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.44□□□□□ -0.26
Lsm3P62311 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm3P62311 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Lsm3P62311 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.43□□□□□ -0.26
Lsm3P62311 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.43□□□□□ -0.26
Lsm3P62311 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Lsm3P62311 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lsm3P62311 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Lsm3P62311 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm3P62311 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm3P62311 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm3P62311 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm3P62311 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm3P62311 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm3P62311 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm3P62311 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm3P62311 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.42□□□□□ -0.26
Lsm3P62311 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.42□□□□□ -0.26
Lsm3P62311 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lsm3P62311 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm3P62311 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.42□□□□□ -0.26
Lsm3P62311 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.42□□□□□ -0.26
Lsm3P62311 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.42□□□□□ -0.26
Lsm3P62311 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.42□□□□□ -0.26
Lsm3P62311 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.42□□□□□ -0.26
Lsm3P62311 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.42□□□□□ -0.26
Lsm3P62311 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lsm3P62311 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm3P62311 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms