Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.92□□□□□ -0.18
Nup43P59235 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.91□□□□□ -0.18
Nup43P59235 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
Nup43P59235 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nup43P59235 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.91□□□□□ -0.18
Nup43P59235 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Gm14822-201ENSMUST00000122247 291 ntBASIC13.91□□□□□ -0.18
Nup43P59235 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.91□□□□□ -0.18
Nup43P59235 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.91□□□□□ -0.18
Nup43P59235 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.91□□□□□ -0.18
Nup43P59235 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.91□□□□□ -0.18
Nup43P59235 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.91□□□□□ -0.18
Nup43P59235 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup43P59235 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.9□□□□□ -0.18
Nup43P59235 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nup43P59235 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.9□□□□□ -0.18
Nup43P59235 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Nup43P59235 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.9□□□□□ -0.18
Nup43P59235 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.9□□□□□ -0.18
Nup43P59235 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.9□□□□□ -0.18
Nup43P59235 Gm15483-201ENSMUST00000120338 456 ntBASIC13.9□□□□□ -0.18
Nup43P59235 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
Nup43P59235 Gm27494-201ENSMUST00000184735 189 ntBASIC13.9□□□□□ -0.18
Nup43P59235 Gm2756-201ENSMUST00000195851 400 ntBASIC13.9□□□□□ -0.18
Nup43P59235 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nup43P59235 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.9□□□□□ -0.18
Nup43P59235 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nup43P59235 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.9□□□□□ -0.18
Nup43P59235 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup43P59235 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.9□□□□□ -0.19
Nup43P59235 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.89□□□□□ -0.19
Nup43P59235 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Nup43P59235 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Gm8749-201ENSMUST00000117737 331 ntBASIC13.89□□□□□ -0.19
Nup43P59235 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Mir1895-201ENSMUST00000122615 79 ntBASIC13.89□□□□□ -0.19
Nup43P59235 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nup43P59235 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.89□□□□□ -0.19
Nup43P59235 Gm9726-201ENSMUST00000180321 678 ntBASIC13.89□□□□□ -0.19
Nup43P59235 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.89□□□□□ -0.19
Nup43P59235 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.89□□□□□ -0.19
Nup43P59235 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.89□□□□□ -0.19
Nup43P59235 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.89□□□□□ -0.19
Nup43P59235 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.89□□□□□ -0.19
Nup43P59235 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms