Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tpm1P58771 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.45■□□□□ 0.22
Tpm1P58771 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.45■□□□□ 0.22
Tpm1P58771 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tpm1P58771 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.45■□□□□ 0.22
Tpm1P58771 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.45■□□□□ 0.22
Tpm1P58771 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.45■□□□□ 0.22
Tpm1P58771 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.45■□□□□ 0.22
Tpm1P58771 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.45■□□□□ 0.22
Tpm1P58771 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Gm27867-201ENSMUST00000184778 125 ntBASIC16.45■□□□□ 0.22
Tpm1P58771 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.45■□□□□ 0.22
Tpm1P58771 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.45■□□□□ 0.22
Tpm1P58771 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tpm1P58771 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.45■□□□□ 0.22
Tpm1P58771 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.45■□□□□ 0.22
Tpm1P58771 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Tpm1P58771 Gm12008-201ENSMUST00000117791 755 ntBASIC16.44■□□□□ 0.22
Tpm1P58771 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Gm7506-201ENSMUST00000207758 815 ntBASIC16.44■□□□□ 0.22
Tpm1P58771 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.44■□□□□ 0.22
Tpm1P58771 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tpm1P58771 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tpm1P58771 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.44■□□□□ 0.22
Tpm1P58771 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tpm1P58771 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.43■□□□□ 0.22
Tpm1P58771 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Tpm1P58771 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.43■□□□□ 0.22
Tpm1P58771 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Tpm1P58771 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tpm1P58771 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.43■□□□□ 0.22
Tpm1P58771 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.43■□□□□ 0.22
Tpm1P58771 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.43■□□□□ 0.22
Tpm1P58771 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms