Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.8□□□□□ -0.04
SmoP56726 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 Gm22175-201ENSMUST00000175007 78 ntBASIC14.8□□□□□ -0.04
SmoP56726 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.8□□□□□ -0.04
SmoP56726 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.8□□□□□ -0.04
SmoP56726 Gm44872-201ENSMUST00000207864 420 ntBASIC14.8□□□□□ -0.04
SmoP56726 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.8□□□□□ -0.04
SmoP56726 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.8□□□□□ -0.04
SmoP56726 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.8□□□□□ -0.04
SmoP56726 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.8□□□□□ -0.04
SmoP56726 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.8□□□□□ -0.04
SmoP56726 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SmoP56726 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SmoP56726 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.8□□□□□ -0.04
SmoP56726 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.79□□□□□ -0.04
SmoP56726 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.79□□□□□ -0.04
SmoP56726 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SmoP56726 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.79□□□□□ -0.04
SmoP56726 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SmoP56726 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.79□□□□□ -0.04
SmoP56726 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SmoP56726 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SmoP56726 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.79□□□□□ -0.04
SmoP56726 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.79□□□□□ -0.04
SmoP56726 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SmoP56726 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SmoP56726 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SmoP56726 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.78□□□□□ -0.04
SmoP56726 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SmoP56726 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Gm6415-201ENSMUST00000118488 348 ntBASIC14.78□□□□□ -0.04
SmoP56726 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.78□□□□□ -0.04
SmoP56726 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.78□□□□□ -0.04
SmoP56726 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Gm27430-201ENSMUST00000184585 107 ntBASIC14.78□□□□□ -0.04
SmoP56726 Gm37230-201ENSMUST00000194491 818 ntBASIC14.78□□□□□ -0.04
SmoP56726 Gm44333-201ENSMUST00000197168 107 ntBASIC14.78□□□□□ -0.04
SmoP56726 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SmoP56726 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.78□□□□□ -0.04
SmoP56726 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SmoP56726 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SmoP56726 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SmoP56726 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SmoP56726 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SmoP56726 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SmoP56726 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SmoP56726 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SmoP56726 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SmoP56726 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms