Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.66□□□□□ -0.54
Rab4aP56371 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.66□□□□□ -0.54
Rab4aP56371 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Gm7791-201ENSMUST00000219066 539 ntBASIC11.66□□□□□ -0.54
Rab4aP56371 Gm18115-201ENSMUST00000221209 621 ntBASIC11.66□□□□□ -0.54
Rab4aP56371 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.66□□□□□ -0.54
Rab4aP56371 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rab4aP56371 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.66□□□□□ -0.54
Rab4aP56371 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.66□□□□□ -0.54
Rab4aP56371 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.66□□□□□ -0.54
Rab4aP56371 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rab4aP56371 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.65□□□□□ -0.54
Rab4aP56371 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Rab4aP56371 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
Rab4aP56371 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.65□□□□□ -0.54
Rab4aP56371 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.65□□□□□ -0.54
Rab4aP56371 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.65□□□□□ -0.54
Rab4aP56371 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.65□□□□□ -0.54
Rab4aP56371 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
Rab4aP56371 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rab4aP56371 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rab4aP56371 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Rab4aP56371 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rab4aP56371 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
Rab4aP56371 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.65□□□□□ -0.55
Rab4aP56371 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rab4aP56371 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rab4aP56371 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rab4aP56371 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Rab4aP56371 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.64□□□□□ -0.55
Rab4aP56371 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rab4aP56371 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rab4aP56371 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.64□□□□□ -0.55
Rab4aP56371 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rab4aP56371 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms