Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdkn2bP55271 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.12□□□□□ -0.15
Cdkn2bP55271 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.11□□□□□ -0.15
Cdkn2bP55271 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdkn2bP55271 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.11□□□□□ -0.15
Cdkn2bP55271 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.11□□□□□ -0.15
Cdkn2bP55271 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdkn2bP55271 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.1□□□□□ -0.15
Cdkn2bP55271 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdkn2bP55271 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Gm9726-201ENSMUST00000180321 678 ntBASIC14.1□□□□□ -0.15
Cdkn2bP55271 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.1□□□□□ -0.15
Cdkn2bP55271 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.1□□□□□ -0.15
Cdkn2bP55271 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdkn2bP55271 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Cdkn2bP55271 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdkn2bP55271 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms