Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.84■□□□□ 0.13
Nub1P54729 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.84■□□□□ 0.13
Nub1P54729 Gm17271-201ENSMUST00000165535 355 ntBASIC15.84■□□□□ 0.13
Nub1P54729 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.84■□□□□ 0.13
Nub1P54729 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.84■□□□□ 0.13
Nub1P54729 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.84■□□□□ 0.13
Nub1P54729 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Nub1P54729 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Nub1P54729 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nub1P54729 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nub1P54729 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nub1P54729 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Nub1P54729 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nub1P54729 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Nub1P54729 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Nub1P54729 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nub1P54729 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nub1P54729 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.83■□□□□ 0.12
Nub1P54729 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.83■□□□□ 0.12
Nub1P54729 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nub1P54729 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.83■□□□□ 0.12
Nub1P54729 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.83■□□□□ 0.12
Nub1P54729 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nub1P54729 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.83■□□□□ 0.12
Nub1P54729 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.83■□□□□ 0.12
Nub1P54729 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Nub1P54729 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.83■□□□□ 0.12
Nub1P54729 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.83■□□□□ 0.12
Nub1P54729 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nub1P54729 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.82■□□□□ 0.12
Nub1P54729 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.82■□□□□ 0.12
Nub1P54729 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.82■□□□□ 0.12
Nub1P54729 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.82■□□□□ 0.12
Nub1P54729 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.82■□□□□ 0.12
Nub1P54729 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nub1P54729 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.82■□□□□ 0.12
Nub1P54729 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.82■□□□□ 0.12
Nub1P54729 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nub1P54729 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nub1P54729 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nub1P54729 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
Nub1P54729 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.81■□□□□ 0.12
Nub1P54729 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms