Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox1P53783 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sox1P53783 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.96□□□□□ -0.01
Sox1P53783 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Sox1P53783 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.96□□□□□ -0.01
Sox1P53783 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Sox1P53783 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Sox1P53783 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.96□□□□□ -0.01
Sox1P53783 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.96□□□□□ -0.01
Sox1P53783 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.96□□□□□ -0.01
Sox1P53783 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Sox1P53783 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox1P53783 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox1P53783 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox1P53783 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Sox1P53783 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.96□□□□□ -0.02
Sox1P53783 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Sox1P53783 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.95□□□□□ -0.02
Sox1P53783 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Sox1P53783 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Sox1P53783 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.95□□□□□ -0.02
Sox1P53783 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Gm8463-201ENSMUST00000208573 613 ntBASIC14.95□□□□□ -0.02
Sox1P53783 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.95□□□□□ -0.02
Sox1P53783 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox1P53783 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.94□□□□□ -0.02
Sox1P53783 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sox1P53783 Gm13216-201ENSMUST00000117145 591 ntBASIC14.94□□□□□ -0.02
Sox1P53783 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Sox1P53783 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.94□□□□□ -0.02
Sox1P53783 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox1P53783 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sox1P53783 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Sox1P53783 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.93□□□□□ -0.02
Sox1P53783 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.93□□□□□ -0.02
Sox1P53783 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 Gm29649-201ENSMUST00000185649 419 ntBASIC14.93□□□□□ -0.02
Sox1P53783 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.93□□□□□ -0.02
Sox1P53783 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
Sox1P53783 Gm40466-201ENSMUST00000212174 422 ntBASIC14.93□□□□□ -0.02
Sox1P53783 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms