Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Gm27742-201ENSMUST00000184667 60 ntBASIC12.23□□□□□ -0.45
Nkx2-1P50220 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.23□□□□□ -0.45
Nkx2-1P50220 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.23□□□□□ -0.45
Nkx2-1P50220 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-1P50220 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.22□□□□□ -0.45
Nkx2-1P50220 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.22□□□□□ -0.45
Nkx2-1P50220 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-1P50220 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-1P50220 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-1P50220 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-1P50220 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.21□□□□□ -0.45
Nkx2-1P50220 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms