Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.93□□□□□ -0.34
GdnfP48540 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.93□□□□□ -0.34
GdnfP48540 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
GdnfP48540 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.92□□□□□ -0.34
GdnfP48540 Gm12008-201ENSMUST00000117791 755 ntBASIC12.92□□□□□ -0.34
GdnfP48540 Gm13418-201ENSMUST00000119097 944 ntBASIC12.92□□□□□ -0.34
GdnfP48540 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Gm6296-201ENSMUST00000222599 943 ntBASIC12.92□□□□□ -0.34
GdnfP48540 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
GdnfP48540 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.92□□□□□ -0.34
GdnfP48540 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
GdnfP48540 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.92□□□□□ -0.34
GdnfP48540 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.92□□□□□ -0.34
GdnfP48540 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GdnfP48540 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
GdnfP48540 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Carlr-201ENSMUST00000181515 2574 ntBASIC12.91□□□□□ -0.34
GdnfP48540 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.91□□□□□ -0.34
GdnfP48540 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GdnfP48540 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
GdnfP48540 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
GdnfP48540 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GdnfP48540 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.91□□□□□ -0.34
GdnfP48540 Gm11452-201ENSMUST00000122376 690 ntBASIC12.91□□□□□ -0.34
GdnfP48540 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.91□□□□□ -0.34
GdnfP48540 Gm11780-201ENSMUST00000136880 516 ntBASIC12.91□□□□□ -0.34
GdnfP48540 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.91□□□□□ -0.34
GdnfP48540 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.91□□□□□ -0.34
GdnfP48540 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
GdnfP48540 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
GdnfP48540 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
GdnfP48540 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GdnfP48540 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
GdnfP48540 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms