Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.83□□□□□ -0.2
Sox2P48432 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox2P48432 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox2P48432 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox2P48432 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sox2P48432 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox2P48432 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Sox2P48432 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Sox2P48432 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox2P48432 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox2P48432 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox2P48432 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Sox2P48432 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox2P48432 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox2P48432 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sox2P48432 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox2P48432 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.82□□□□□ -0.2
Sox2P48432 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox2P48432 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox2P48432 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox2P48432 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sox2P48432 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox2P48432 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox2P48432 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.81□□□□□ -0.2
Sox2P48432 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.81□□□□□ -0.2
Sox2P48432 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.81□□□□□ -0.2
Sox2P48432 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.81□□□□□ -0.2
Sox2P48432 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.81□□□□□ -0.2
Sox2P48432 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Sox2P48432 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Sox2P48432 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sox2P48432 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.81□□□□□ -0.2
Sox2P48432 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox2P48432 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.8□□□□□ -0.2
Sox2P48432 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sox2P48432 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sox2P48432 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Sox2P48432 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sox2P48432 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox2P48432 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.8□□□□□ -0.2
Sox2P48432 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Sox2P48432 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Sox2P48432 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox2P48432 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sox2P48432 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox2P48432 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms