Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps4bP46467 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps4bP46467 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps4bP46467 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps4bP46467 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Vps4bP46467 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Vps4bP46467 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps4bP46467 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps4bP46467 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps4bP46467 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Vps4bP46467 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Vps4bP46467 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps4bP46467 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps4bP46467 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.94□□□□□ -0.02
Vps4bP46467 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.94□□□□□ -0.02
Vps4bP46467 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps4bP46467 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.94□□□□□ -0.02
Vps4bP46467 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Vps4bP46467 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.94□□□□□ -0.02
Vps4bP46467 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.94□□□□□ -0.02
Vps4bP46467 Gm10060-201ENSMUST00000212002 111 ntBASIC14.94□□□□□ -0.02
Vps4bP46467 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Vps4bP46467 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps4bP46467 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps4bP46467 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Vps4bP46467 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps4bP46467 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.93□□□□□ -0.02
Vps4bP46467 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.93□□□□□ -0.02
Vps4bP46467 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps4bP46467 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps4bP46467 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps4bP46467 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps4bP46467 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.93□□□□□ -0.02
Vps4bP46467 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps4bP46467 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vps4bP46467 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps4bP46467 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps4bP46467 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.93□□□□□ -0.02
Vps4bP46467 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps4bP46467 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps4bP46467 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Vps4bP46467 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Vps4bP46467 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.92□□□□□ -0.02
Vps4bP46467 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms