Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Mir7684-201ENSMUST00000183858 60 ntBASIC13.93□□□□□ -0.18
Nkx2-6P43688 Gm28630-201ENSMUST00000187806 498 ntBASIC13.93□□□□□ -0.18
Nkx2-6P43688 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.93□□□□□ -0.18
Nkx2-6P43688 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-6P43688 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx2-6P43688 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-6P43688 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Gm27437-201ENSMUST00000183429 107 ntBASIC13.92□□□□□ -0.18
Nkx2-6P43688 Mir8102-201ENSMUST00000184148 139 ntBASIC13.92□□□□□ -0.18
Nkx2-6P43688 Mir6977-201ENSMUST00000184960 64 ntBASIC13.92□□□□□ -0.18
Nkx2-6P43688 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-6P43688 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.91□□□□□ -0.18
Nkx2-6P43688 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx2-6P43688 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.91□□□□□ -0.18
Nkx2-6P43688 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.91□□□□□ -0.18
Nkx2-6P43688 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-6P43688 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms