Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
HttP42859 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HttP42859 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HttP42859 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HttP42859 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.41■□□□□ 0.06
HttP42859 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.41■□□□□ 0.06
HttP42859 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HttP42859 Gm22331-201ENSMUST00000158066 136 ntBASIC15.4■□□□□ 0.06
HttP42859 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.4■□□□□ 0.06
HttP42859 Gm29705-201ENSMUST00000212598 474 ntBASIC15.4■□□□□ 0.06
HttP42859 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HttP42859 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HttP42859 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.4■□□□□ 0.06
HttP42859 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HttP42859 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HttP42859 Gm8213-201ENSMUST00000118191 441 ntBASIC15.4■□□□□ 0.06
HttP42859 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.4■□□□□ 0.06
HttP42859 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HttP42859 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HttP42859 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HttP42859 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HttP42859 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HttP42859 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Gm8227-201ENSMUST00000223306 571 ntBASIC15.39■□□□□ 0.05
HttP42859 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.39■□□□□ 0.05
HttP42859 Gm13786-201ENSMUST00000122371 333 ntBASIC15.39■□□□□ 0.05
HttP42859 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HttP42859 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HttP42859 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.38■□□□□ 0.05
HttP42859 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HttP42859 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Gm13216-201ENSMUST00000117145 591 ntBASIC15.38■□□□□ 0.05
HttP42859 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.38■□□□□ 0.05
HttP42859 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Snora73a-201ENSMUST00000082453 205 ntBASIC15.38■□□□□ 0.05
HttP42859 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HttP42859 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.38■□□□□ 0.05
HttP42859 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.38■□□□□ 0.05
HttP42859 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.38■□□□□ 0.05
HttP42859 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HttP42859 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HttP42859 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HttP42859 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HttP42859 Gm1335-201ENSMUST00000121653 386 ntBASIC15.37■□□□□ 0.05
HttP42859 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HttP42859 Gm9368-201ENSMUST00000219348 831 ntBASIC15.37■□□□□ 0.05
HttP42859 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.37■□□□□ 0.05
HttP42859 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HttP42859 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
HttP42859 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HttP42859 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.37■□□□□ 0.05
HttP42859 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HttP42859 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
HttP42859 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HttP42859 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HttP42859 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HttP42859 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HttP42859 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.37■□□□□ 0.05
HttP42859 Gm44364-201ENSMUST00000198368 141 ntBASIC15.37■□□□□ 0.05
HttP42859 Gm6334-201ENSMUST00000207083 228 ntBASIC15.37■□□□□ 0.05
HttP42859 Gm5363-201ENSMUST00000211927 938 ntBASIC15.37■□□□□ 0.05
HttP42859 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms