Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.49□□□□□ -0.25
Nkx2-2P42586 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Gm11025-201ENSMUST00000140773 466 ntBASIC13.49□□□□□ -0.25
Nkx2-2P42586 Gm5479-201ENSMUST00000160578 435 ntBASIC13.49□□□□□ -0.25
Nkx2-2P42586 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Gm9182-201ENSMUST00000217829 639 ntBASIC13.49□□□□□ -0.25
Nkx2-2P42586 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.49□□□□□ -0.25
Nkx2-2P42586 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.49□□□□□ -0.25
Nkx2-2P42586 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-2P42586 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.48□□□□□ -0.25
Nkx2-2P42586 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.48□□□□□ -0.25
Nkx2-2P42586 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.48□□□□□ -0.25
Nkx2-2P42586 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Gm6973-201ENSMUST00000117080 721 ntBASIC13.48□□□□□ -0.25
Nkx2-2P42586 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Gm25911-201ENSMUST00000157621 56 ntBASIC13.48□□□□□ -0.25
Nkx2-2P42586 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
Nkx2-2P42586 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.48□□□□□ -0.25
Nkx2-2P42586 Gm45098-201ENSMUST00000207179 657 ntBASIC13.48□□□□□ -0.25
Nkx2-2P42586 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-2P42586 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.47□□□□□ -0.25
Nkx2-2P42586 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.47□□□□□ -0.25
Nkx2-2P42586 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.47□□□□□ -0.25
Nkx2-2P42586 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.47□□□□□ -0.25
Nkx2-2P42586 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-2P42586 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-2P42586 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms