Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.09□□□□□ -0.15
Tnfsf9P41274 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Gm18049-201ENSMUST00000208909 581 ntBASIC14.09□□□□□ -0.15
Tnfsf9P41274 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Tnfsf9P41274 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Tnfsf9P41274 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
Tnfsf9P41274 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.08□□□□□ -0.16
Tnfsf9P41274 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.08□□□□□ -0.16
Tnfsf9P41274 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.08□□□□□ -0.16
Tnfsf9P41274 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.08□□□□□ -0.16
Tnfsf9P41274 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.08□□□□□ -0.16
Tnfsf9P41274 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf9P41274 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tnfsf9P41274 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.07□□□□□ -0.16
Tnfsf9P41274 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.07□□□□□ -0.16
Tnfsf9P41274 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Gm8410-201ENSMUST00000117225 605 ntBASIC14.07□□□□□ -0.16
Tnfsf9P41274 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.07□□□□□ -0.16
Tnfsf9P41274 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf9P41274 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms