Protein–RNA interactions for Protein: P41155

Ltb, Lymphotoxin-beta, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbP41155 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LtbP41155 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.73□□□□□ -0.37
LtbP41155 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.73□□□□□ -0.37
LtbP41155 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.73□□□□□ -0.37
LtbP41155 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.73□□□□□ -0.37
LtbP41155 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LtbP41155 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LtbP41155 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LtbP41155 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
LtbP41155 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LtbP41155 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LtbP41155 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LtbP41155 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LtbP41155 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.72□□□□□ -0.37
LtbP41155 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LtbP41155 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.72□□□□□ -0.37
LtbP41155 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
LtbP41155 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
LtbP41155 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
LtbP41155 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LtbP41155 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LtbP41155 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.71□□□□□ -0.37
LtbP41155 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
LtbP41155 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.71□□□□□ -0.37
LtbP41155 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LtbP41155 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LtbP41155 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.71□□□□□ -0.37
LtbP41155 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.71□□□□□ -0.37
LtbP41155 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Gm13365-201ENSMUST00000121188 973 ntBASIC12.71□□□□□ -0.37
LtbP41155 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LtbP41155 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.71□□□□□ -0.37
LtbP41155 Mir6956-201ENSMUST00000183598 62 ntBASIC12.71□□□□□ -0.37
LtbP41155 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.71□□□□□ -0.37
LtbP41155 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.71□□□□□ -0.37
LtbP41155 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.71□□□□□ -0.37
LtbP41155 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LtbP41155 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LtbP41155 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbP41155 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LtbP41155 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbP41155 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbP41155 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbP41155 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
LtbP41155 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbP41155 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbP41155 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LtbP41155 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms