Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.63□□□□□ -0.23
Foxa1P35582 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Foxa1P35582 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Carlr-201ENSMUST00000181515 2574 ntBASIC13.63□□□□□ -0.23
Foxa1P35582 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Foxa1P35582 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Foxa1P35582 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Foxa1P35582 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Foxa1P35582 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Foxa1P35582 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Foxa1P35582 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Foxa1P35582 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.62□□□□□ -0.23
Foxa1P35582 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.62□□□□□ -0.23
Foxa1P35582 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.62□□□□□ -0.23
Foxa1P35582 Gm15483-201ENSMUST00000120338 456 ntBASIC13.62□□□□□ -0.23
Foxa1P35582 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Gm2213-201ENSMUST00000197485 688 ntBASIC13.62□□□□□ -0.23
Foxa1P35582 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.62□□□□□ -0.23
Foxa1P35582 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.62□□□□□ -0.23
Foxa1P35582 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.62□□□□□ -0.23
Foxa1P35582 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Foxa1P35582 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxa1P35582 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxa1P35582 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxa1P35582 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Foxa1P35582 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.61□□□□□ -0.23
Foxa1P35582 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.61□□□□□ -0.23
Foxa1P35582 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Foxa1P35582 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Foxa1P35582 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.61□□□□□ -0.23
Foxa1P35582 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.61□□□□□ -0.23
Foxa1P35582 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms