Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.86■□□□□ 0.29
Vcam1P29533 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vcam1P29533 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.86■□□□□ 0.29
Vcam1P29533 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Vcam1P29533 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Vcam1P29533 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.86■□□□□ 0.29
Vcam1P29533 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.86■□□□□ 0.29
Vcam1P29533 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.86■□□□□ 0.29
Vcam1P29533 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vcam1P29533 Gm20445-201ENSMUST00000061905 565 ntBASIC16.86■□□□□ 0.29
Vcam1P29533 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.86■□□□□ 0.29
Vcam1P29533 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Vcam1P29533 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vcam1P29533 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Vcam1P29533 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vcam1P29533 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.85■□□□□ 0.29
Vcam1P29533 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Vcam1P29533 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.85■□□□□ 0.29
Vcam1P29533 Gm12859-201ENSMUST00000117834 427 ntBASIC16.85■□□□□ 0.29
Vcam1P29533 Gm9522-201ENSMUST00000182394 926 ntBASIC16.85■□□□□ 0.29
Vcam1P29533 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Vcam1P29533 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.85■□□□□ 0.29
Vcam1P29533 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.85■□□□□ 0.29
Vcam1P29533 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.85■□□□□ 0.29
Vcam1P29533 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.85■□□□□ 0.29
Vcam1P29533 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Vcam1P29533 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Vcam1P29533 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vcam1P29533 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Vcam1P29533 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.84■□□□□ 0.29
Vcam1P29533 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.84■□□□□ 0.29
Vcam1P29533 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.84■□□□□ 0.29
Vcam1P29533 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Gm6916-202ENSMUST00000205523 195 ntBASIC16.84■□□□□ 0.29
Vcam1P29533 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.84■□□□□ 0.29
Vcam1P29533 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Vcam1P29533 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Vcam1P29533 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Vcam1P29533 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vcam1P29533 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vcam1P29533 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.83■□□□□ 0.29
Vcam1P29533 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Vcam1P29533 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vcam1P29533 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.83■□□□□ 0.28
Vcam1P29533 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Gm14042-201ENSMUST00000120139 833 ntBASIC16.83■□□□□ 0.28
Vcam1P29533 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.83■□□□□ 0.28
Vcam1P29533 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.83■□□□□ 0.28
Vcam1P29533 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vcam1P29533 Gm42612-201ENSMUST00000197986 623 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms