Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RxrbP28704 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RxrbP28704 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RxrbP28704 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RxrbP28704 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RxrbP28704 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RxrbP28704 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RxrbP28704 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RxrbP28704 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
RxrbP28704 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RxrbP28704 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.78□□□□□ -0.04
RxrbP28704 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.78□□□□□ -0.04
RxrbP28704 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RxrbP28704 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.78□□□□□ -0.04
RxrbP28704 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.78□□□□□ -0.04
RxrbP28704 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.78□□□□□ -0.04
RxrbP28704 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.78□□□□□ -0.04
RxrbP28704 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RxrbP28704 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RxrbP28704 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RxrbP28704 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RxrbP28704 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RxrbP28704 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RxrbP28704 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.77□□□□□ -0.04
RxrbP28704 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RxrbP28704 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Gm12644-201ENSMUST00000119935 606 ntBASIC14.77□□□□□ -0.05
RxrbP28704 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.77□□□□□ -0.05
RxrbP28704 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.77□□□□□ -0.05
RxrbP28704 Gm17807-201ENSMUST00000186869 298 ntBASIC14.77□□□□□ -0.05
RxrbP28704 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.77□□□□□ -0.05
RxrbP28704 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.77□□□□□ -0.05
RxrbP28704 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RxrbP28704 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RxrbP28704 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.77□□□□□ -0.05
RxrbP28704 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.77□□□□□ -0.05
RxrbP28704 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.77□□□□□ -0.05
RxrbP28704 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RxrbP28704 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.76□□□□□ -0.05
RxrbP28704 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RxrbP28704 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RxrbP28704 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.76□□□□□ -0.05
RxrbP28704 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RxrbP28704 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RxrbP28704 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RxrbP28704 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RxrbP28704 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.76□□□□□ -0.05
RxrbP28704 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RxrbP28704 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms