Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pde6aP27664 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pde6aP27664 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.07■□□□□ 0.32
Pde6aP27664 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pde6aP27664 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.07■□□□□ 0.32
Pde6aP27664 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.07■□□□□ 0.32
Pde6aP27664 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Gm37230-201ENSMUST00000194491 818 ntBASIC17.07■□□□□ 0.32
Pde6aP27664 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6aP27664 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pde6aP27664 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.06■□□□□ 0.32
Pde6aP27664 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.06■□□□□ 0.32
Pde6aP27664 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.06■□□□□ 0.32
Pde6aP27664 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.06■□□□□ 0.32
Pde6aP27664 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pde6aP27664 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pde6aP27664 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6aP27664 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.05■□□□□ 0.32
Pde6aP27664 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.05■□□□□ 0.32
Pde6aP27664 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Pde6aP27664 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.05■□□□□ 0.32
Pde6aP27664 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Gm43125-201ENSMUST00000201724 730 ntBASIC17.05■□□□□ 0.32
Pde6aP27664 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pde6aP27664 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pde6aP27664 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.05■□□□□ 0.32
Pde6aP27664 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.05■□□□□ 0.32
Pde6aP27664 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6aP27664 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pde6aP27664 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pde6aP27664 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.04■□□□□ 0.32
Pde6aP27664 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pde6aP27664 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.04■□□□□ 0.32
Pde6aP27664 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.04■□□□□ 0.32
Pde6aP27664 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.04■□□□□ 0.32
Pde6aP27664 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.04■□□□□ 0.32
Pde6aP27664 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.04■□□□□ 0.32
Pde6aP27664 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.04■□□□□ 0.32
Pde6aP27664 Gm18737-201ENSMUST00000173594 937 ntBASIC17.04■□□□□ 0.32
Pde6aP27664 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.04■□□□□ 0.32
Pde6aP27664 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.04■□□□□ 0.32
Pde6aP27664 Gm43474-201ENSMUST00000196415 774 ntBASIC17.04■□□□□ 0.32
Pde6aP27664 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms