Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Cd40lgP27548 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cd40lgP27548 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Cd40lgP27548 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Cd40lgP27548 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.6□□□□□ -0.23
Cd40lgP27548 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.6□□□□□ -0.23
Cd40lgP27548 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.6□□□□□ -0.23
Cd40lgP27548 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Gm2756-201ENSMUST00000195851 400 ntBASIC13.59□□□□□ -0.23
Cd40lgP27548 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.59□□□□□ -0.23
Cd40lgP27548 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.59□□□□□ -0.23
Cd40lgP27548 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.59□□□□□ -0.23
Cd40lgP27548 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.59□□□□□ -0.23
Cd40lgP27548 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd40lgP27548 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.59□□□□□ -0.23
Cd40lgP27548 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cd40lgP27548 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cd40lgP27548 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cd40lgP27548 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cd40lgP27548 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cd40lgP27548 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Cd40lgP27548 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.58□□□□□ -0.24
Cd40lgP27548 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Gm12008-201ENSMUST00000117791 755 ntBASIC13.58□□□□□ -0.24
Cd40lgP27548 Gm6736-201ENSMUST00000166583 948 ntBASIC13.58□□□□□ -0.24
Cd40lgP27548 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cd40lgP27548 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.58□□□□□ -0.24
Cd40lgP27548 Gm27397-201ENSMUST00000184997 107 ntBASIC13.58□□□□□ -0.24
Cd40lgP27548 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.58□□□□□ -0.24
Cd40lgP27548 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.58□□□□□ -0.24
Cd40lgP27548 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms