Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Sdc1P18828 Gm16061-201ENSMUST00000122167 857 ntBASIC12.08□□□□□ -0.48
Sdc1P18828 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.08□□□□□ -0.48
Sdc1P18828 Gm26039-201ENSMUST00000158152 144 ntBASIC12.08□□□□□ -0.48
Sdc1P18828 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sdc1P18828 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.08□□□□□ -0.48
Sdc1P18828 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sdc1P18828 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.08□□□□□ -0.48
Sdc1P18828 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.08□□□□□ -0.48
Sdc1P18828 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sdc1P18828 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Sdc1P18828 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc1P18828 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sdc1P18828 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Sdc1P18828 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sdc1P18828 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.07□□□□□ -0.48
Sdc1P18828 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.07□□□□□ -0.48
Sdc1P18828 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.07□□□□□ -0.48
Sdc1P18828 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.07□□□□□ -0.48
Sdc1P18828 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.07□□□□□ -0.48
Sdc1P18828 Gm37856-201ENSMUST00000191634 999 ntBASIC12.07□□□□□ -0.48
Sdc1P18828 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.07□□□□□ -0.48
Sdc1P18828 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.07□□□□□ -0.48
Sdc1P18828 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sdc1P18828 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc1P18828 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sdc1P18828 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Sdc1P18828 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sdc1P18828 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.06□□□□□ -0.48
Sdc1P18828 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sdc1P18828 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.06□□□□□ -0.48
Sdc1P18828 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sdc1P18828 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.06□□□□□ -0.48
Sdc1P18828 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc1P18828 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc1P18828 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sdc1P18828 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sdc1P18828 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sdc1P18828 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms