Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hoxc6P10629 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hoxc6P10629 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hoxc6P10629 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.27■□□□□ 0.2
Hoxc6P10629 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.27■□□□□ 0.2
Hoxc6P10629 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Hoxc6P10629 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Hoxc6P10629 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc6P10629 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc6P10629 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Hoxc6P10629 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Hoxc6P10629 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hoxc6P10629 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.26■□□□□ 0.19
Hoxc6P10629 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.26■□□□□ 0.19
Hoxc6P10629 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Hoxc6P10629 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Gm44719-201ENSMUST00000206404 149 ntBASIC16.26■□□□□ 0.19
Hoxc6P10629 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hoxc6P10629 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.26■□□□□ 0.19
Hoxc6P10629 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hoxc6P10629 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Hoxc6P10629 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc6P10629 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.25■□□□□ 0.19
Hoxc6P10629 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.25■□□□□ 0.19
Hoxc6P10629 Gm8602-201ENSMUST00000184045 607 ntBASIC16.25■□□□□ 0.19
Hoxc6P10629 Mir7085-201ENSMUST00000184353 66 ntBASIC16.25■□□□□ 0.19
Hoxc6P10629 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.25■□□□□ 0.19
Hoxc6P10629 AA619741-201ENSMUST00000195095 646 ntBASIC16.25■□□□□ 0.19
Hoxc6P10629 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Mir125a-201ENSMUST00000083545 68 ntBASIC16.25■□□□□ 0.19
Hoxc6P10629 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.25■□□□□ 0.19
Hoxc6P10629 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.25■□□□□ 0.19
Hoxc6P10629 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc6P10629 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hoxc6P10629 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.24■□□□□ 0.19
Hoxc6P10629 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hoxc6P10629 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms