Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.52■□□□□ 0.24
Polr2aP08775 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.52■□□□□ 0.24
Polr2aP08775 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Polr2aP08775 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Polr2aP08775 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Polr2aP08775 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Polr2aP08775 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Polr2aP08775 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Polr2aP08775 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Polr2aP08775 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.52■□□□□ 0.23
Polr2aP08775 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Polr2aP08775 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Polr2aP08775 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Polr2aP08775 Gm18905-201ENSMUST00000205454 928 ntBASIC16.51■□□□□ 0.23
Polr2aP08775 Gm8598-201ENSMUST00000221184 836 ntBASIC16.51■□□□□ 0.23
Polr2aP08775 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.51■□□□□ 0.23
Polr2aP08775 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Polr2aP08775 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Polr2aP08775 Gm12928-201ENSMUST00000117115 573 ntBASIC16.51■□□□□ 0.23
Polr2aP08775 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Polr2aP08775 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Polr2aP08775 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Polr2aP08775 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Polr2aP08775 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Gm11814-201ENSMUST00000119515 929 ntBASIC16.5■□□□□ 0.23
Polr2aP08775 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.5■□□□□ 0.23
Polr2aP08775 Gm38241-201ENSMUST00000192641 898 ntBASIC16.5■□□□□ 0.23
Polr2aP08775 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.5■□□□□ 0.23
Polr2aP08775 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Polr2aP08775 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Polr2aP08775 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Polr2aP08775 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Polr2aP08775 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.5■□□□□ 0.23
Polr2aP08775 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Polr2aP08775 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Polr2aP08775 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Polr2aP08775 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Polr2aP08775 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.49■□□□□ 0.23
Polr2aP08775 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Polr2aP08775 Gm22331-201ENSMUST00000158066 136 ntBASIC16.49■□□□□ 0.23
Polr2aP08775 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.49■□□□□ 0.23
Polr2aP08775 Gm27572-201ENSMUST00000183702 255 ntBASIC16.49■□□□□ 0.23
Polr2aP08775 Gm21470-201ENSMUST00000187680 696 ntBASIC16.49■□□□□ 0.23
Polr2aP08775 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.49■□□□□ 0.23
Polr2aP08775 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.49■□□□□ 0.23
Polr2aP08775 Gm7399-201ENSMUST00000032395 858 ntBASIC16.49■□□□□ 0.23
Polr2aP08775 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Polr2aP08775 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Polr2aP08775 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Polr2aP08775 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Polr2aP08775 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.49■□□□□ 0.23
Polr2aP08775 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Polr2aP08775 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Polr2aP08775 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Polr2aP08775 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Polr2aP08775 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Polr2aP08775 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Polr2aP08775 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Polr2aP08775 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.49■□□□□ 0.23
Polr2aP08775 Gm7561-201ENSMUST00000211203 886 ntBASIC16.49■□□□□ 0.23
Polr2aP08775 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.49■□□□□ 0.23
Polr2aP08775 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Polr2aP08775 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Polr2aP08775 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Polr2aP08775 Prob1-201ENSMUST00000097619 3021 ntBASIC16.49■□□□□ 0.23
Polr2aP08775 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Polr2aP08775 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Polr2aP08775 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Polr2aP08775 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Polr2aP08775 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Polr2aP08775 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Polr2aP08775 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Polr2aP08775 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Polr2aP08775 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC16.48■□□□□ 0.23
Polr2aP08775 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Polr2aP08775 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms