Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
NefmP08553 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
NefmP08553 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NefmP08553 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NefmP08553 Gm28182-201ENSMUST00000188354 2477 ntBASIC21.77■■□□□ 1.07
NefmP08553 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
NefmP08553 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Gm11764-201ENSMUST00000120221 623 ntBASIC21.76■■□□□ 1.07
NefmP08553 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC21.76■■□□□ 1.07
NefmP08553 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.76■■□□□ 1.07
NefmP08553 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
NefmP08553 AC159649.2-201ENSMUST00000222984 3223 ntBASIC21.76■■□□□ 1.07
NefmP08553 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NefmP08553 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC21.75■■□□□ 1.07
NefmP08553 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC21.75■■□□□ 1.07
NefmP08553 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Gm42471-201ENSMUST00000201457 1865 ntBASIC21.75■■□□□ 1.07
NefmP08553 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC21.75■■□□□ 1.07
NefmP08553 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Gm7222-201ENSMUST00000117512 906 ntBASIC21.75■■□□□ 1.07
NefmP08553 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.75■■□□□ 1.07
NefmP08553 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC21.75■■□□□ 1.07
NefmP08553 AC155729.1-201ENSMUST00000227758 544 ntBASIC21.75■■□□□ 1.07
NefmP08553 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NefmP08553 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NefmP08553 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC21.75■■□□□ 1.07
NefmP08553 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NefmP08553 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.74■■□□□ 1.07
NefmP08553 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC21.74■■□□□ 1.07
NefmP08553 AC126250.1-201ENSMUST00000228343 1768 ntBASIC21.74■■□□□ 1.07
NefmP08553 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
NefmP08553 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NefmP08553 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Best4-ps-201ENSMUST00000129783 1380 ntBASIC21.74■■□□□ 1.07
NefmP08553 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NefmP08553 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NefmP08553 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NefmP08553 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
NefmP08553 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
NefmP08553 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NefmP08553 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NefmP08553 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NefmP08553 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NefmP08553 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.73■■□□□ 1.07
NefmP08553 Gm9726-201ENSMUST00000180321 678 ntBASIC21.73■■□□□ 1.07
NefmP08553 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NefmP08553 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NefmP08553 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NefmP08553 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NefmP08553 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NefmP08553 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NefmP08553 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NefmP08553 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NefmP08553 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC21.73■■□□□ 1.07
NefmP08553 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NefmP08553 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms