Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm10253-201ENSMUST00000194270 940 ntBASIC14.48□□□□□ -0.09
Hoxa4P06798 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Hoxa4P06798 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.48□□□□□ -0.09
Hoxa4P06798 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa4P06798 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa4P06798 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa4P06798 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa4P06798 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa4P06798 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
Hoxa4P06798 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa4P06798 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.48□□□□□ -0.09
Hoxa4P06798 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa4P06798 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa4P06798 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa4P06798 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa4P06798 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.48□□□□□ -0.09
Hoxa4P06798 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.47□□□□□ -0.09
Hoxa4P06798 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa4P06798 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.47□□□□□ -0.09
Hoxa4P06798 Gm14701-201ENSMUST00000117156 348 ntBASIC14.47□□□□□ -0.09
Hoxa4P06798 Gm13015-201ENSMUST00000118674 204 ntBASIC14.47□□□□□ -0.09
Hoxa4P06798 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.47□□□□□ -0.09
Hoxa4P06798 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.47□□□□□ -0.09
Hoxa4P06798 Gm14042-201ENSMUST00000120139 833 ntBASIC14.47□□□□□ -0.09
Hoxa4P06798 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.47□□□□□ -0.09
Hoxa4P06798 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Hoxa4P06798 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.47□□□□□ -0.09
Hoxa4P06798 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa4P06798 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa4P06798 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.47□□□□□ -0.09
Hoxa4P06798 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa4P06798 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.47□□□□□ -0.09
Hoxa4P06798 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.46□□□□□ -0.09
Hoxa4P06798 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Hoxa4P06798 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hoxa4P06798 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Hoxa4P06798 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Gm10275-202ENSMUST00000168697 495 ntBASIC14.46□□□□□ -0.09
Hoxa4P06798 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.46□□□□□ -0.09
Hoxa4P06798 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Gm10275-201ENSMUST00000092620 635 ntBASIC14.46□□□□□ -0.09
Hoxa4P06798 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.46□□□□□ -0.09
Hoxa4P06798 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa4P06798 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa4P06798 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa4P06798 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa4P06798 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.46□□□□□ -0.1
Hoxa4P06798 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxa4P06798 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxa4P06798 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa4P06798 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa4P06798 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Hoxa4P06798 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms