Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
TcraP01849 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
TcraP01849 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Matn2-206ENSMUST00000228570 2798 ntBASIC10.78□□□□□ -0.68
TcraP01849 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
TcraP01849 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
TcraP01849 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
TcraP01849 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.78□□□□□ -0.68
TcraP01849 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Mir6404-201ENSMUST00000183699 94 ntBASIC10.78□□□□□ -0.68
TcraP01849 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.78□□□□□ -0.68
TcraP01849 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.78□□□□□ -0.68
TcraP01849 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
TcraP01849 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
TcraP01849 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.78□□□□□ -0.68
TcraP01849 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TcraP01849 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.78□□□□□ -0.68
TcraP01849 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
TcraP01849 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TcraP01849 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
TcraP01849 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TcraP01849 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TcraP01849 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
TcraP01849 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.77□□□□□ -0.68
TcraP01849 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.77□□□□□ -0.68
TcraP01849 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TcraP01849 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TcraP01849 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TcraP01849 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
TcraP01849 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
TcraP01849 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.77□□□□□ -0.69
TcraP01849 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.77□□□□□ -0.69
TcraP01849 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.77□□□□□ -0.69
TcraP01849 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
TcraP01849 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
TcraP01849 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.77□□□□□ -0.69
TcraP01849 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
TcraP01849 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.77□□□□□ -0.69
TcraP01849 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TcraP01849 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TcraP01849 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
TcraP01849 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.76□□□□□ -0.69
TcraP01849 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
TcraP01849 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.76□□□□□ -0.69
TcraP01849 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
TcraP01849 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.76□□□□□ -0.69
TcraP01849 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.76□□□□□ -0.69
TcraP01849 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
TcraP01849 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms