Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Syn1O88935 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syn1O88935 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.1■□□□□ 0.01
Syn1O88935 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Syn1O88935 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Syn1O88935 Gm12390-201ENSMUST00000117897 397 ntBASIC15.1■□□□□ 0.01
Syn1O88935 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.1■□□□□ 0.01
Syn1O88935 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.1■□□□□ 0.01
Syn1O88935 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.1■□□□□ 0.01
Syn1O88935 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.1■□□□□ 0.01
Syn1O88935 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Syn1O88935 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Syn1O88935 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Syn1O88935 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syn1O88935 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Syn1O88935 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.09■□□□□ 0.01
Syn1O88935 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Syn1O88935 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.09■□□□□ 0.01
Syn1O88935 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.09■□□□□ 0.01
Syn1O88935 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.09■□□□□ 0.01
Syn1O88935 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Gm27839-201ENSMUST00000184242 106 ntBASIC15.09■□□□□ 0.01
Syn1O88935 Gm27701-201ENSMUST00000184498 110 ntBASIC15.09■□□□□ 0.01
Syn1O88935 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.09■□□□□ 0.01
Syn1O88935 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Syn1O88935 Gm5356-201ENSMUST00000093326 615 ntBASIC15.09■□□□□ 0.01
Syn1O88935 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.09■□□□□ 0.01
Syn1O88935 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Syn1O88935 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.09■□□□□ 0.01
Syn1O88935 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
Syn1O88935 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.09■□□□□ 0.01
Syn1O88935 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Syn1O88935 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
Syn1O88935 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syn1O88935 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Syn1O88935 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.08■□□□□ 0
Syn1O88935 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.08■□□□□ 0
Syn1O88935 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Syn1O88935 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms