Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Apaf1O88879 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Gm10253-201ENSMUST00000194270 940 ntBASIC19.13■□□□□ 0.65
Apaf1O88879 Gm37230-201ENSMUST00000194491 818 ntBASIC19.13■□□□□ 0.65
Apaf1O88879 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.13■□□□□ 0.65
Apaf1O88879 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Apaf1O88879 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Apaf1O88879 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
Apaf1O88879 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Apaf1O88879 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Apaf1O88879 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.12■□□□□ 0.65
Apaf1O88879 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Apaf1O88879 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.12■□□□□ 0.65
Apaf1O88879 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.12■□□□□ 0.65
Apaf1O88879 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.12■□□□□ 0.65
Apaf1O88879 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Apaf1O88879 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Apaf1O88879 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Apaf1O88879 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Apaf1O88879 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Apaf1O88879 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Apaf1O88879 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.11■□□□□ 0.65
Apaf1O88879 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.11■□□□□ 0.65
Apaf1O88879 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Gm25925-201ENSMUST00000158314 306 ntBASIC19.11■□□□□ 0.65
Apaf1O88879 Mir6956-201ENSMUST00000183598 62 ntBASIC19.11■□□□□ 0.65
Apaf1O88879 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Apaf1O88879 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Apaf1O88879 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Apaf1O88879 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC19.11■□□□□ 0.65
Apaf1O88879 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Apaf1O88879 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Apaf1O88879 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.1■□□□□ 0.65
Apaf1O88879 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Apaf1O88879 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.1■□□□□ 0.65
Apaf1O88879 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Gm18766-201ENSMUST00000189811 808 ntBASIC19.1■□□□□ 0.65
Apaf1O88879 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.1■□□□□ 0.65
Apaf1O88879 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.1■□□□□ 0.65
Apaf1O88879 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Apaf1O88879 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Apaf1O88879 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC19.09■□□□□ 0.65
Apaf1O88879 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Apaf1O88879 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Apaf1O88879 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Apaf1O88879 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms