Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Best1O88870 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.13□□□□□ -0.15
Best1O88870 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.13□□□□□ -0.15
Best1O88870 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.13□□□□□ -0.15
Best1O88870 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Best1O88870 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Best1O88870 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Best1O88870 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Best1O88870 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Best1O88870 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.12□□□□□ -0.15
Best1O88870 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Best1O88870 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Best1O88870 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Gm27631-201ENSMUST00000184163 466 ntBASIC14.12□□□□□ -0.15
Best1O88870 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.12□□□□□ -0.15
Best1O88870 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.12□□□□□ -0.15
Best1O88870 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.12□□□□□ -0.15
Best1O88870 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
Best1O88870 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Best1O88870 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.12□□□□□ -0.15
Best1O88870 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.12□□□□□ -0.15
Best1O88870 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Best1O88870 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Best1O88870 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.11□□□□□ -0.15
Best1O88870 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Best1O88870 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.11□□□□□ -0.15
Best1O88870 Gm15653-201ENSMUST00000119247 907 ntBASIC14.11□□□□□ -0.15
Best1O88870 Gm14042-201ENSMUST00000120139 833 ntBASIC14.11□□□□□ -0.15
Best1O88870 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.11□□□□□ -0.15
Best1O88870 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.11□□□□□ -0.15
Best1O88870 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Best1O88870 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Best1O88870 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.1□□□□□ -0.15
Best1O88870 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.1□□□□□ -0.15
Best1O88870 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms