Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tom1O88746 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tom1O88746 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tom1O88746 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tom1O88746 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tom1O88746 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Tom1O88746 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.25■□□□□ 0.67
Tom1O88746 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tom1O88746 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC19.25■□□□□ 0.67
Tom1O88746 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Tom1O88746 Gm11803-201ENSMUST00000119966 444 ntBASIC19.25■□□□□ 0.67
Tom1O88746 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.25■□□□□ 0.67
Tom1O88746 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC19.25■□□□□ 0.67
Tom1O88746 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tom1O88746 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Tom1O88746 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tom1O88746 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC19.25■□□□□ 0.67
Tom1O88746 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tom1O88746 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.24■□□□□ 0.67
Tom1O88746 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Gm12241-201ENSMUST00000118330 726 ntBASIC19.24■□□□□ 0.67
Tom1O88746 Gm16342-201ENSMUST00000124025 1025 ntBASIC19.24■□□□□ 0.67
Tom1O88746 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC19.24■□□□□ 0.67
Tom1O88746 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 AU022133-201ENSMUST00000200601 873 ntBASIC19.24■□□□□ 0.67
Tom1O88746 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.24■□□□□ 0.67
Tom1O88746 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Gm38037-201ENSMUST00000192600 1624 ntBASIC19.24■□□□□ 0.67
Tom1O88746 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC19.24■□□□□ 0.67
Tom1O88746 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tom1O88746 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
Tom1O88746 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Gm22323-201ENSMUST00000103832 109 ntBASIC19.23■□□□□ 0.67
Tom1O88746 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Gm15371-201ENSMUST00000117057 784 ntBASIC19.23■□□□□ 0.67
Tom1O88746 Gm11793-201ENSMUST00000120433 981 ntBASIC19.23■□□□□ 0.67
Tom1O88746 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Gm27331-201ENSMUST00000183705 60 ntBASIC19.23■□□□□ 0.67
Tom1O88746 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC19.23■□□□□ 0.67
Tom1O88746 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tom1O88746 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC19.23■□□□□ 0.67
Tom1O88746 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tom1O88746 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tom1O88746 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tom1O88746 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tom1O88746 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tom1O88746 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC19.22■□□□□ 0.67
Tom1O88746 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tom1O88746 Gm6334-201ENSMUST00000207083 228 ntBASIC19.22■□□□□ 0.67
Tom1O88746 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC19.22■□□□□ 0.67
Tom1O88746 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tom1O88746 Gm5161-201ENSMUST00000075243 853 ntBASIC19.22■□□□□ 0.67
Tom1O88746 Gm44207-201ENSMUST00000204568 1424 ntBASIC19.22■□□□□ 0.67
Tom1O88746 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tom1O88746 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tom1O88746 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tom1O88746 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tom1O88746 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tom1O88746 Dancr-204ENSMUST00000132389 2347 ntBASIC19.22■□□□□ 0.67
Tom1O88746 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tom1O88746 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tom1O88746 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tom1O88746 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms