Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hcn3O88705 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.12□□□□□ -0.15
Hcn3O88705 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hcn3O88705 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hcn3O88705 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Hcn3O88705 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Hcn3O88705 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hcn3O88705 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.11□□□□□ -0.15
Hcn3O88705 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.11□□□□□ -0.15
Hcn3O88705 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Hcn3O88705 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.11□□□□□ -0.15
Hcn3O88705 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.11□□□□□ -0.15
Hcn3O88705 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.11□□□□□ -0.15
Hcn3O88705 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.11□□□□□ -0.15
Hcn3O88705 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hcn3O88705 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hcn3O88705 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hcn3O88705 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.11□□□□□ -0.15
Hcn3O88705 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn3O88705 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Hcn3O88705 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.1□□□□□ -0.15
Hcn3O88705 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hcn3O88705 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Hcn3O88705 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.1□□□□□ -0.15
Hcn3O88705 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.1□□□□□ -0.15
Hcn3O88705 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hcn3O88705 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.1□□□□□ -0.15
Hcn3O88705 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.1□□□□□ -0.15
Hcn3O88705 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.1□□□□□ -0.15
Hcn3O88705 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.1□□□□□ -0.15
Hcn3O88705 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hcn3O88705 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn3O88705 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.09□□□□□ -0.15
Hcn3O88705 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Gm12644-201ENSMUST00000119935 606 ntBASIC14.09□□□□□ -0.15
Hcn3O88705 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.09□□□□□ -0.15
Hcn3O88705 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Gm25745-201ENSMUST00000174945 133 ntBASIC14.09□□□□□ -0.15
Hcn3O88705 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.09□□□□□ -0.15
Hcn3O88705 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.09□□□□□ -0.15
Hcn3O88705 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.09□□□□□ -0.15
Hcn3O88705 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hcn3O88705 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.09□□□□□ -0.15
Hcn3O88705 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms