Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hcn1O88704 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.13□□□□□ -0.15
Hcn1O88704 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.13□□□□□ -0.15
Hcn1O88704 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.13□□□□□ -0.15
Hcn1O88704 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hcn1O88704 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Hcn1O88704 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Hcn1O88704 Gm12260-201ENSMUST00000122447 411 ntBASIC14.13□□□□□ -0.15
Hcn1O88704 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.13□□□□□ -0.15
Hcn1O88704 Gm27300-201ENSMUST00000184085 97 ntBASIC14.13□□□□□ -0.15
Hcn1O88704 Gm27335-201ENSMUST00000184758 97 ntBASIC14.13□□□□□ -0.15
Hcn1O88704 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.13□□□□□ -0.15
Hcn1O88704 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Hcn1O88704 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Hcn1O88704 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Hcn1O88704 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hcn1O88704 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Hcn1O88704 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.12□□□□□ -0.15
Hcn1O88704 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.12□□□□□ -0.15
Hcn1O88704 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hcn1O88704 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.12□□□□□ -0.15
Hcn1O88704 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.12□□□□□ -0.15
Hcn1O88704 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.12□□□□□ -0.15
Hcn1O88704 Gm8000-201ENSMUST00000188378 592 ntBASIC14.12□□□□□ -0.15
Hcn1O88704 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hcn1O88704 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.12□□□□□ -0.15
Hcn1O88704 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hcn1O88704 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.12□□□□□ -0.15
Hcn1O88704 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hcn1O88704 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.12□□□□□ -0.15
Hcn1O88704 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn1O88704 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.11□□□□□ -0.15
Hcn1O88704 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.11□□□□□ -0.15
Hcn1O88704 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hcn1O88704 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Hcn1O88704 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hcn1O88704 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Gm15467-201ENSMUST00000120582 445 ntBASIC14.11□□□□□ -0.15
Hcn1O88704 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.11□□□□□ -0.15
Hcn1O88704 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Hcn1O88704 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.11□□□□□ -0.15
Hcn1O88704 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.11□□□□□ -0.15
Hcn1O88704 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.11□□□□□ -0.15
Hcn1O88704 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Hcn1O88704 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.11□□□□□ -0.15
Hcn1O88704 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms