Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
ClppO88696 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.4□□□□□ -0.1
ClppO88696 Gm5312-201ENSMUST00000203728 547 ntBASIC14.4□□□□□ -0.1
ClppO88696 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.4□□□□□ -0.1
ClppO88696 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.4□□□□□ -0.1
ClppO88696 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClppO88696 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
ClppO88696 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.39□□□□□ -0.11
ClppO88696 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.39□□□□□ -0.11
ClppO88696 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.39□□□□□ -0.11
ClppO88696 Auts2-212ENSMUST00000178555 309 ntBASIC14.39□□□□□ -0.11
ClppO88696 Gm10576-201ENSMUST00000191927 825 ntBASIC14.39□□□□□ -0.11
ClppO88696 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.39□□□□□ -0.11
ClppO88696 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.39□□□□□ -0.11
ClppO88696 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.39□□□□□ -0.11
ClppO88696 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.39□□□□□ -0.11
ClppO88696 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ClppO88696 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ClppO88696 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ClppO88696 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClppO88696 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ClppO88696 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 BC037039-201ENSMUST00000192003 2205 ntBASIC14.38□□□□□ -0.11
ClppO88696 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.38□□□□□ -0.11
ClppO88696 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.38□□□□□ -0.11
ClppO88696 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ClppO88696 Rpph1-201ENSMUST00000175096 319 ntBASIC14.38□□□□□ -0.11
ClppO88696 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ClppO88696 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.38□□□□□ -0.11
ClppO88696 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
ClppO88696 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 App-207ENSMUST00000227737 2827 ntBASIC14.38□□□□□ -0.11
ClppO88696 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ClppO88696 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ClppO88696 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ClppO88696 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClppO88696 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.37□□□□□ -0.11
ClppO88696 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.37□□□□□ -0.11
ClppO88696 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms