Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cldn1O88551 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.64□□□□□ -0.39
Cldn1O88551 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cldn1O88551 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cldn1O88551 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Gm11543-201ENSMUST00000120758 370 ntBASIC12.64□□□□□ -0.39
Cldn1O88551 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.64□□□□□ -0.39
Cldn1O88551 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cldn1O88551 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cldn1O88551 Gm43433-201ENSMUST00000196573 481 ntBASIC12.64□□□□□ -0.39
Cldn1O88551 Gm9063-201ENSMUST00000223299 582 ntBASIC12.64□□□□□ -0.39
Cldn1O88551 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cldn1O88551 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cldn1O88551 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn1O88551 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.64□□□□□ -0.39
Cldn1O88551 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Syt7-204ENSMUST00000223586 1344 ntBASIC12.63□□□□□ -0.39
Cldn1O88551 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn1O88551 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cldn1O88551 Gm14928-201ENSMUST00000120198 477 ntBASIC12.63□□□□□ -0.39
Cldn1O88551 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn1O88551 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Gm18737-201ENSMUST00000173594 937 ntBASIC12.63□□□□□ -0.39
Cldn1O88551 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.63□□□□□ -0.39
Cldn1O88551 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.63□□□□□ -0.39
Cldn1O88551 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.63□□□□□ -0.39
Cldn1O88551 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cldn1O88551 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.63□□□□□ -0.39
Cldn1O88551 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Cldn1O88551 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cldn1O88551 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cldn1O88551 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn1O88551 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn1O88551 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cldn1O88551 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cldn1O88551 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cldn1O88551 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.62□□□□□ -0.39
Cldn1O88551 Gm13015-201ENSMUST00000118674 204 ntBASIC12.62□□□□□ -0.39
Cldn1O88551 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.62□□□□□ -0.39
Cldn1O88551 Gm25144-201ENSMUST00000179561 110 ntBASIC12.62□□□□□ -0.39
Cldn1O88551 Gm25352-201ENSMUST00000179815 110 ntBASIC12.62□□□□□ -0.39
Cldn1O88551 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Gm28630-201ENSMUST00000187806 498 ntBASIC12.62□□□□□ -0.39
Cldn1O88551 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.62□□□□□ -0.39
Cldn1O88551 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms